Waco, Texas

John Kyle Cooper

Biomedical engineer and researcher with a PhD in Biomedical Sciences. My work spans human perception, experimental systems, instrumentation, data analysis, and device prototyping.

Experience

The University of Tokyo

Nov 2025 – Sep 2026

Project Researcher (Postdoctoral) · IRCN · Tokyo, Japan

Developed interactive puzzle experiments to study creative problem solving, combining web-based tasks, LLM APIs, and Tobii eye tracking. Prepared research protocols and technical reports, and explored AI-supported evaluation of creative ideas.

KU Leuven

Oct 2021 – Oct 2025

Doctoral Researcher · Leuven, Belgium

Designed and analyzed audiovisual EEG experiments on speech perception. Developed Unity-based tasks, calibrated sound levels, and verified audiovisual timing. Contributed to shared analysis code and searchable technical documentation, and mentored two master's students.

University of Rochester

Aug 2019 – May 2021

Research Assistant and Lab Manager · Rochester, New York

Built a Python-controlled audiovisual EEG experiment and verified sub-millisecond timing. Collected and organized data for thesis and multi-site studies, and coordinated laboratory equipment, supplies, and participant scheduling.

Texas A&M University

Aug 2016 – May 2019

Research Assistant · College Station, Texas

Designed and assembled power supplies for optical coherence tomography, including component selection and CAD-designed, 3D-printed enclosures. Worked on imaging calibration, research PC assembly, and an Unreal Engine VR viewer for 3D cochlear scans.

Engineering projects

Orthotic rehabilitation device

2018 – 2019

Lynntech Inc. · Texas A&M senior design

Defined specifications with company engineers and built a prototype using Arduino, soldered electronics, and 3D-printed parts. Documented the design and fabrication process and presented the result.

Respiratory support device concept

2017

Enmodes GmbH · Study-abroad collaboration · Aachen, Germany

Created AutoCAD and Blender visualizations and technical documentation for a proposed ECMO device, and presented the concept to company engineers.

Skills & tools

Research & analysis
Experimental design, human-participant studies, biomedical signal processing, Python, MATLAB, R, scikit-learn.
Instrumentation
EEG acquisition, Tobii eye tracking, optical imaging support, sound-level calibration, audiovisual timing verification, research equipment upkeep.
Prototyping
PC assembly, electronic component selection, power-supply assembly, soldering, Arduino, CAD, 3D printing.
Software & documentation
Unity, Unreal Engine, JavaScript, GitLab, technical writing, shared data workflows, LLM APIs and AI-assisted development.

Education

KU Leuven

2021 – 2025

PhD · Biomedical Sciences

University of Rochester

2019 – 2021

MSc · Biomedical Engineering

Texas A&M University

2015 – 2019

BSc · Biomedical Engineering
Minor in Electrical Engineering

Study abroad: biosciences in Bonn, Germany; engineering ethics in Thessaloniki, Greece.

Research

Selected publications and preprint

Objectively measuring audiovisual effects in noise using virtual human speakers

J. K. Cooper, J. Vanthornhout, A. van Wieringen, T. Francart · Trends in Hearing · 2025

Neural Tracking of Audiovisual Effects in Noise Using Deep Neural Network-Generated Virtual Humans

J. K. Cooper, J. Vanthornhout, A. van Wieringen, T. Francart · bioRxiv preprint · 2025

Large-scale multi-site study shows no association between musical training and early auditory neural sound encoding

K. L. Whiteford et al., including J. K. Cooper · Nature Communications · 2025

Teaching & outreach

Grants & recognition